fitPoly: Genotype Calling for Bi-Allelic Marker Assays

Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) <doi:10.1186/1471-2105-12-172>.

Version: 3.0.0
Depends: R (≥ 3.2.0)
Imports: foreach
Suggests: devEMF, doParallel, grDevices
Published: 2018-03-16
DOI: 10.32614/CRAN.package.fitPoly
Author: Roeland E. Voorrips and Gerrit Gort
Maintainer: Roeland E. Voorrips <roeland.voorrips at>
License: GPL-2
NeedsCompilation: no
CRAN checks: fitPoly results


Reference manual: fitPoly.pdf


Package source: fitPoly_3.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): fitPoly_3.0.0.tgz, r-oldrel (arm64): fitPoly_3.0.0.tgz, r-release (x86_64): fitPoly_3.0.0.tgz, r-oldrel (x86_64): fitPoly_3.0.0.tgz

Reverse dependencies:

Reverse suggests: mappoly


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